Publications HAL des membres

Bernard Offmann

      2020

    • [1] A Machine Learning Approach for Efficient Selection of Enzyme Concentrations and Its Application for Flux Optimization
      Anamya Nagaraja, Philippe Charton, Xavier Cadet, Nicolas Fontaine, Mathieu Delsaut, Birgit Wiltschi, Alena Voit, Bernard Offmann, Cédric Damour, Brigitte Grondin-Perez, Frédéric Cadet.
      https://hal.univ-reunion.fr/hal-02509044

      2019

    • [2] Structural variations within proteins can be as large as variations observed across their homologues
      Iyanar Vetrivel, Alexandre de Brevern, Frédéric Cadet, Narayanaswamy Srinivasan, Bernard Offmann.
      https://www.hal.inserm.fr/inserm-02913845
    • [3] Genetic background and immunological status influence B cell repertoire diversity in mice
      Nancy Chaaya, Melody Shahsavarian, Irene Maffucci, Alain Friboulet, Bernard Offmann, Jean-Benoist Leger, Sylvain Rousseau, Bérangère Avalle, Séverine Padiolleau-Lefevre.
      https://hal.archives-ouvertes.fr/hal-02307169
    • [4] Flux prediction using artificial neural network (ANN) for the upper part of glycolysis
      Anamya Ajjolli Nagaraja, Nicolas Fontaine, Mathieu Delsaut, Philippe Charton, Cédric Damour, Bernard Offmann, Brigitte Grondin-Perez, Frédéric Cadet.
      https://hal.univ-reunion.fr/hal-02747960
    • [5] Flux prediction using artificial neural network (ANN) for the upper part of glycolysis
      Anamya Nagaraja, Nicolas Fontaine, Mathieu Delsaut, Philippe Charton, Cedric Damour, Bernard Offmann, Brigitte Grondin-Perez, Frédéric Cadet.
      https://www.hal.inserm.fr/inserm-02196731
    • [6] Characterization of glycosylated flavonoids obtained from enzymatic reaction by matrix free laser desorption ionization mass spectrometry (LDI-MS).
      Séverine Boisard, Timothée Brouté, Julie Guerry, Michaela Skopikova, Ingrid Freuze, Claude Solleux, Corinne Miral, Bernard Offmann, Andreas Schinkovitz, Pascal Richomme, David Guilet.
      https://hal.univ-angers.fr/hal-02749401

      2017

    • [7] The alternatively spliced LRRFIP1 Isoform-1 is a key regulator of the Wnt/β-catenin transcription pathway
      Pauline Labbé, Emilie Faure, Simon Lecointe, Solena Le Scouarnec, Florence Kyndt, Marie Marrec, Thierry Le Tourneau, Bernard Offmann, Cécile Duplaà, Stéphane Zaffran, Jean Jacques Schott, Jean Merot.
      https://hal.archives-ouvertes.fr/hal-01832152
    • [8] Multitarget selection of catalytic antibodies with β-lactamase activity using phage display
      Melody Shahsavarian, Nancy Chaaya, Narciso Costa, Didier Boquet, Alexandre Atkinson, Bernard Offmann, Srini Kaveri, Sébastien Lacroix Desmazes, Alain Friboulet, Bérangère Avalle, Séverine Padiolleau-Lefèvre.
      https://hal.utc.fr/hal-01988396
    • [9] Knowledge-based prediction of protein backbone conformation using a structural alphabet
      Iyanar Vetrivel, Swapnil Mahajan, Manoj Tyagi, Lionel Hoffmann, Yves-Henri Sanejouand, Narayanaswamy Srinivasan, Alexandre de Brevern, Frédéric Cadet, Bernard Offmann.
      https://hal.archives-ouvertes.fr/hal-01677391
    • [11] Use of a structural alphabet to find compatible folds for amino acid sequences
      Swapnil Mahajan, Alexandre de Brevern, Yves-Henri Sanejouand, Narayanaswamy Srinivasan, Bernard Offmann.
      https://hal.archives-ouvertes.fr/hal-01677393

      2014

    • [12] A web-based tool for rational screening of mutants libraries using ProSAR
      Magali Berland, Bernard Offmann, Isabelle Andre, Magali Remaud Simeon, Philippe Charton.
      https://hal.univ-reunion.fr/hal-01471908
    • [13] Correlation between local structural dynamics of proteins inferred from NMR ensembles and evolutionary dynamics of homologues of known structure.
      Swapnil Mahajan, Alexandre de Brevern, Bernard Offmann, Narayanaswamy Srinivasan.
      https://www.hal.inserm.fr/inserm-00926204

      2013

    • [14] A new method for spectral characterization of protein families from sequence information using Fourier Transform
      Magali Berland, Bernard Offmann, Isabelle André, Magali Remaud Simeon, Philippe Charton.
      https://hal.univ-reunion.fr/hal-01187204

      2012

    • [16] Prediction of enzyme activity: Implementation of the ProSAR method and assessment on experimental dataset from different sources
      Magali Berland, Bernard Offmann, Isabelle André, Magali Remaud Simeon, Philippe Charton.
      https://hal.univ-reunion.fr/hal-01188006

      2011

    • [17] ProSAR: Implementation and assessment of an approach based on a genetic algorithm towards directed evolution of enzymes
      Magali Berland, Philippe Charton, Magali Remaud Simeon, Bernard Offmann.
      https://hal.univ-reunion.fr/hal-01188016

      2010

    • [18] PB-PENTAdb : a web resource for the analysis and prediction of local backbone structure and flexibility using pentapeptide protein blocks
      Bernard Offmann, M. Tyagi, A. Joseph, M. Drula, M. Grondin, E. Frumence, Aurore Vaitinadapoule, Frédéric Cadet, Narayanaswamy Srinivasan, Alexandre de Brevern.
      https://hal.univ-reunion.fr/hal-01198468
    • [19] Identification and characterisation of novel atypical odorant binding proteins in the mosquito genomes
      Malini Manoharan, Matthieu Ng Fuk Chong, Aurore Vaitinadapoule, E. Frumence, Ramanathan Sowdhamini, Bernard Offmann.
      https://hal.univ-reunion.fr/hal-01198469
    • [20] A short survey on protein blocks.
      Agnel Joseph, Garima Agarwal, Swapnil Mahajan, Jean-Christophe Gelly, Lakshmipuram Swapna, Bernard Offmann, Frédéric Cadet, Aurélie Bornot, Manoj Tyagi, Hélène Valadié, Bohdan Schneider, Catherine Etchebest, Narayanaswamy Srinivasan, Alexandre de Brevern.
      https://www.hal.inserm.fr/inserm-00512823
    • [21] Comparative sequence analysis of CP12, a small protein involved in the formation of a Calvin cycle complex in photosynthetic organisms
      R. Groben, D. Kaloudas, C.A. Raines, Bernard Offmann, Stephen Maberly, B. Gontero.
      https://hal.archives-ouvertes.fr/hal-00677735
    • [22] Comparative sequence analysis of CP12, a small protein involved in the formation of a Calvin cycle complex in photosynthetic organisms
      René Groben, Dimitrios Kaloudas, Christine A. Raines, Bernard Offmann, Stephen Maberly, B. Gontero.
      https://hal.archives-ouvertes.fr/hal-00677532
    • [23] Systematic search for putative new domain families in Mycoplasma gallisepticum genome
      Chilamakuri Cs Reddy, Sane Sudha Rani, Bernard Offmann, R. Sowdhamini.
      https://hal.univ-reunion.fr/hal-01198471
    • [42] Length Variations amongst Protein Domain Superfamilies and Consequences on Structure and Function
      Sankaran Sandhya, Saane Sudha Rani, Barah Pankaj, Madabosse Kande Govind, Bernard Offmann, Narayanaswamy Srinivasan, Ramanathan Sowdhamini.
      https://hal.univ-reunion.fr/hal-01198473

      2008

    • [43] Analysis on conservation of disulphide bonds and their structural features in homologous protein domain families
      Ratna R. Thangudu, Malini Manoharan, N. Srinivasan, Frédéric Cadet, R. Sowdhamini, Bernard Offmann.
      https://hal.univ-reunion.fr/hal-01198476v2
    • [44] CUSP: an algorithm to distinguish structurally conserved and unconserved regions in protein domain alignments and its application in the study of large length variations
      Sankaran Sandhya, Barah Pankaj, Kande Madabosse Govind, Bernard Offmann, Narayanaswamy Srinivasan, Ramanathan Sowdhamini.
      https://hal.univ-reunion.fr/hal-01198475v2
    • [49] Evolutionary dynamics of protein-protein interactions. A case study using the DJ-1/PfpI family of enzyme
      L. S. Swapna, Bernard Offmann, Narayanaswamy Srinivasan.
      https://hal.univ-reunion.fr/hal-01198477
    • [50] Analycys: A database for conservation and conformation of disulphide bonds in homologous protein domains
      Ratna R. Thangudu, Priyanka Sharma, N. Srinivasan, Bernard Offmann.
      https://hal.univ-reunion.fr/hal-01198478
    • [52] A substitution matrix for structural alphabet based on structural alignment of homologous proteins and its applications.
      Manoj Tyagi, Venkataraman Gowri, Narayanaswamy Srinivasan, Alexandre de Brevern, Bernard Offmann.
      https://www.hal.inserm.fr/inserm-00133760
    • [53] Protein Block Expert (PBE): a web-based protein structure analysis server using a structural alphabet.
      Manoj Tyagi, Priyanka Sharma, C. S. Swamy, Frédéric Cadet, N. Srinivasan, Alexandre de Brevern, Bernard Offmann.
      https://www.hal.inserm.fr/inserm-00133751
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Groupement de Recherche en Intégration de données Omics à Très grande Echelle