Publications HAL des membres

Damien Eveillard

      2020

    • [1] Probabilistic modeling to estimate jellyfish ecophysiological properties and size distributions
      Simon Ramondenc, Damien Eveillard, Lionel Guidi, Fabien Lombard, Benoit Delahaye.
      https://hal.archives-ouvertes.fr/hal-02539195
    • [2] Evolutionary Mechanisms of Long-Term Genome Diversification Associated With Niche Partitioning in Marine Picocyanobacteria
      Hugo Doré, Gregory Farrant, Ulysse Guyet, Julie Haguait, Florian Humily, Morgane Ratin, Frances Pitt, Martin Ostrowski, Christophe Six, Loraine Brillet-Guéguen, Mark Hoebeke, Antoine Bisch, Gildas Le Corguillé, Erwan Corre, Karine Labadie, Jean-Marc Aury, Patrick Wincker, Dong Han Choi, Jae Hoon Noh, Damien Eveillard, David Scanlan, Frédéric Partensky, Laurence Garczarek.
      https://hal.archives-ouvertes.fr/hal-02938656
    • [3] Roadmap for naming uncultivated Archaea and Bacteria
      Alison Murray, John Freudenstein, Simonetta Gribaldo, Roland Hatzenpichler, Philip Hugenholtz, Peter Kämpfer, Konstantinos Konstantinidis, Christopher Lane, R. Thane Papke, Donovan Parks, Ramon Rossello-Mora, Matthew Stott, Iain Sutcliffe, J. Cameron Thrash, Stephanus Venter, William Whitman, Silvia Acinas, Rudolf Amann, Karthik Anantharaman, Jean Armengaud, Brett Baker, Roman Barco, Helge Bode, Eric Boyd, Carrie Brady, Paul Carini, Patrick Chain, Daniel Colman, Kristen Deangelis, Maria Asuncion de los Rios, Paulina Estrada-de los Santos, Christopher Dunlap, Jonathan Eisen, David Emerson, Thijs Ettema, Damien Eveillard, Peter Girguis, Ute Hentschel, James Hollibaugh, Laura Hug, William Inskeep, Elena Ivanova, Hans-Peter Klenk, Wen-Jun Li, Karen Lloyd, Frank Löffler, Thulani Makhalanyane, Duane Moser, Takuro Nunoura, Marike Palmer, Victor Parro, Carlos Pedrós-Alió, Alexander Probst, Theo Smits, Andrew Steen, Emma Steenkamp, Anja Spang, Frank Stewart, James Tiedje, Peter Vandamme, Michael Wagner, Feng-Ping Wang, Brian Hedlund, Anna-Louise Reysenbach.
      https://hal.archives-ouvertes.fr/hal-02863761
    • [4] Synergic Effects of Temperature and Irradiance on the Physiology of the Marine Synechococcus Strain WH7803
      Ulysse Guyet, Ngoc Nguyen, Hugo Doré, Julie Haguait, Justine Pittera, Maël Conan, Morgane Ratin, Erwan Corre, Gildas Le Corguillé, Loraine Brillet-Guéguen, Mark Hoebeke, Christophe Six, Claudia Steglich, Anne Siegel, Damien Eveillard, Frédéric Partensky, Laurence Garczarek.
      https://hal.sorbonne-universite.fr/hal-02929424
    • [5] Linking Spatial and Temporal Dynamic of Bacterioplankton Communities With Ecological Strategies Across a Coastal Frontal Area
      Clarisse Lemonnier, Morgan Perennou, Damien Eveillard, Antonio Fernandez-Guerra, Aude Leynaert, Louis Marié, Hilary Morrison, Laurent Mémery, Christine Paillard, Lois Maignien.
      https://hal.archives-ouvertes.fr/hal-02938091
    • [6] Uncovering the Core Microbiome and Distribution of Palmerolide in Synoicum adareanum Across the Anvers Island Archipelago, Antarctica
      Alison Murray, Nicole Avalon, Lucas Bishop, Karen Davenport, Erwan Delage, Armand E.K. Dichosa, Damien Eveillard, Mary Higham, Sofia Kokkaliari, Chien-Chi Lo, Christian Riesenfeld, Ryan Young, Patrick S.G. Chain, Bill Baker.
      https://hal.archives-ouvertes.fr/hal-02862365
    • [7] Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
      Daniel Richter, Romain Watteaux, Thomas Vannier, Jade Leconte, Paul Frémont, Gabriel Reygondeau, Nicolas Maillet, Nicolas Henry, Gaëtan Benoit, Antonio Fernandez-Guerra, Samir Suweis, Romain Narci, Cédric Berney, Damien Eveillard, Frédérick Gavory, Lionel Guidi, Karine Labadie, Eric Mahieu, Julie Poulain, Sarah Romac, Simon Roux, Céline Dimier, Stefanie Kandels, Marc Picheral, Sarah Searson, Stéphane Pesant, Jean-Marc Aury, Jennifer Brum, Claire Lemaitre, Eric Pelletier, Peer Bork, Shinichi Sunagawa, Lee Karp-Boss, Chris Bowler, Matthew Sullivan, Eric Karsenti, Mahendra Mariadassou, Ian Probert, Pierre Peterlongo, Patrick Wincker, Colomban de Vargas, Maurizio Ribera D'alcalà, Daniele Iudicone, Olivier Jaillon.
      https://hal.inria.fr/hal-02399723
    • [8] Tara Oceans: towards global ocean ecosystems biology
      Shinichi Sunagawa, Silvia Acinas, Peer Bork, Chris Bowler, Damien Eveillard, Gabriel Gorsky, Lionel Guidi, Daniele Iudicone, Eric Karsenti, Fabien Lombard, Hiroyuki Ogata, Stéphane Pesant, Matthew Sullivan, Patrick Wincker, Colomban de Vargas.
      https://hal.archives-ouvertes.fr/hal-02862376

      2019

    • [9] Observational Needs Supporting Marine Ecosystems Modeling and Forecasting: From the Global Ocean to Regional and Coastal Systems
      Antonietta Capotondi, Michael Jacox, Chris Bowler, Maria Kavanaugh, Patrick Lehodey, Daniel Barrie, Stephanie Brodie, Samuel Chaffron, Wei Cheng, Daniela Dias, Damien Eveillard, Lionel Guidi, Daniele Iudicone, Nicole Lovenduski, Janet Nye, Ivonne Ortiz, Douglas Pirhalla, Mercedes Pozo Buil, Vincent Saba, Scott Sheridan, Samantha Siedlecki, Aneesh Subramanian, Colomban de Vargas, Emanuele Di Lorenzo, Scott Doney, Albert Hermann, Terrence Joyce, Mark Merrifield, Arthur Miller, Fabrice Not, Stéphane Pesant.
      https://hal.archives-ouvertes.fr/hal-02316446
    • [10] Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems
      Luigi Caputi, Quentin Carradec, Damien Eveillard, Amos Kirilovsky, Eric Pelletier, Juan J Pierella Karlusich, Fabio Rocha Jimenez Vieira, Emilie Villar, Samuel Chaffron, Shruti Malviya, Eleonora Scalco, Silvia Acinas, Adriana Alberti, Jean-Marc Aury, Anne-Sophie Benoiston, Alexis Bertrand, Tristan Biard, Lucie Bittner, Martine Boccara, Jennifer Brum, Christophe Brunet, Greta Busseni, Anna Carratalà, Hervé Claustre, Luis Pedro Coelho, Sébastien Colin, Salvatore d'Aniello, Corinne da Silva, Marianna del Core, Hugo Doré, Stéphane Gasparini, Florian Kokoszka, Jean-Louis Jamet, Christophe Lejeusne, Cyrille Lepoivre, Magali Lescot, Gipsi Lima-Mendez, Fabien Lombard, Julius Lukeš, Nicolas Maillet, Mohammed-Amin Madoui, Elodie Martinez, Maria Grazia Mazzocchi, Mario Néou, Javier Paz-Yepes, Julie Poulain, Simon Ramondenc, Jean-Baptiste Romagnan, Simon Roux, Daniela Salvagio Manta, Remo Sanges, Mario Sprovieri, Shinichi Sunagawa, Vincent Taillandier, Atsuko Tanaka, Leila Tirichine, Camille Trottier, Julia Uitz, Alaguraj Veluchamy, Jana Veselá, Flora Vincent, Sheree Yau, Stefanie Kandels-Lewis, Sarah Searson, Céline Dimier, Marc Picheral, Peer Bork, Emmanuel Boss, Colomban de Vargas, Michael Follows, Nigel Grimsley, Lionel Guidi, Pascal Hingamp, Eric Karsenti, Paolo Sordino, Lars Stemmann, Matthew Sullivan, Alessandro Tagliabue, Adriana Zingone, Laurence Garczarek, Fabrizio d'Ortenzio, Pierre Testor, Fabrice Not, Maurizio Ribera d'Alcalà, Patrick Wincker, Chris Bowler, Daniele Iudicone, Gabriel Gorsky, Olivier Jaillon, Lee Karp-Boss, Uros Krzic, Hiroyuki Ogata, Stéphane Pesant, Jeroen Raes, Emmanuel Reynaud, Christian Sardet, Mike Sieracki, Sabrina Speich, Didier Velayoudon.
      https://hal-univ-tln.archives-ouvertes.fr/hal-02074931
    • [11] A community perspective on the concept of marine holobionts: state-of-the-art, challenges, and future directions
      Simon Dittami, Enrique Arboleda, Jean-Christophe Auguet, Arite Bigalke, Enora Briand, Paco Cárdenas, Ulisse Cardini, Johan Decelle, Ashwin Engelen, Damien Eveillard, Claire Gachon, Sarah Griffiths, Tilmann Harder, Ehsan Kayal, Elena Kazamia, François Lallier, Mónica Medina, Ezequiel Marzinelli, Teresa Morganti, Laura Pons, Soizic Prado, José Pintado Valverde, Mahasweta Saha, Marc-Andre Selosse, Derek Skillings, Willem Stock, Shinichi Sunagawa, Eve Toulza, Alexey Vorobev, Catherine Leblanc, Fabrice Not.
      https://hal.archives-ouvertes.fr/hal-02169877
    • [12] Probabilistic Modeling of Microbial Metabolic Networks for Integrating Partial Quantitative Knowledge Within the Nitrogen Cycle
      Damien Eveillard, Nicholas Bouskill, Damien Vintache, Julien Gras, Bess Ward, Jérémie Bourdon.
      https://hal.archives-ouvertes.fr/hal-01996045

      2018

    • [13] Structure and co-occurrence patterns in microbial communities under acute environmental stress reveal ecological factors fostering resilience
      Dinka Mandakovic, Claudia Rojas, Jonathan Maldonado, Mauricio Latorre, Dante Travisany, Erwan Delage, Audrey Bihouee, Géraldine Jean, Francisca Diaz, Beatriz Fernández-Gómez, Pablo Cabrera, Alexis Gaete, Claudio Latorre, Rodrigo Gutierrez, Alejandro Maass, Veronica Cambiazo, Sergio Navarrete, Damien Eveillard, Mauricio Gonzalez.
      https://hal.archives-ouvertes.fr/hal-01774624
    • [15] Modelling the complexity of plankton communities exploiting omics potential: From present challenges to an integrative pipeline
      Domenico d'Alelio, Damien Eveillard, Victoria Coles, Luigi Caputi, Maurizio Ribera D’alcalà, Daniele Iudicone.
      https://hal.archives-ouvertes.fr/hal-01909434
    • [16] Identification of transcription factors involved in the phenotype of a domesticated oleaginous microalgae strain of Tisochrysis lutea
      S. Thiriet-Rupert, Gregory Carrier, C. Trottier, Damien Eveillard, B. Schoefs, G. Bougaran, J.-P. Cadoret, B. Chénais, B. Saint-Jean.
      https://hal.archives-ouvertes.fr/hal-01677336
    • [18] Gene Expression Analysis of Zobellia galactanivorans during the Degradation of Algal Polysaccharides Reveals both Substrate-Specific and Shared Transcriptome-Wide Responses
      François Thomas, Philippe Bordron, Damien Eveillard, Gurvan Michel.
      https://hal.archives-ouvertes.fr/hal-01613034
    • [19] Toward a better understanding of the plant microbiota
      Victoria Potdevin, Marie Chevallier, Ruben Garrido Oter, Anne Siegel, Stéphane Hacquard, Damien Eveillard, Philippe Vandenkoornhuyse.
      https://hal.inria.fr/hal-01576743
    • [21] Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks
      Sylvain Prigent, Clémence Frioux, Simon M Dittami, Sven Thiele, Abdelhalim Larhlimi, Guillaume Collet, Gutknecht Fabien, Jeanne Got, Damien Eveillard, Jérémie Bourdon, Frédéric Plewniak, Thierry Tonon, Anne Siegel.
      https://hal.inria.fr/hal-01449100
    • [22] Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks
      Sylvain Prigent, Clémence Frioux, Simon Dittami, Sven Thiele, Abdelhalim Larhlimi, Guillaume Collet, Fabien Gutknecht, Jeanne Got, Damien Eveillard, Jérémie Bourdon, Frédéric Plewniak, Thierry Tonon, Anne Siegel.
      https://hal.inrae.fr/hal-02937671
    • [24] Combining graph and flux-based structures to decipher phenotypic essential metabolites within metabolic networks
      Julie Laniau, Clémence Frioux, Jacques Nicolas, Caroline Baroukh, Maria-Paz Cortés, Jeanne Got, Camille Trottier, Damien Eveillard, Anne Siegel.
      https://hal.archives-ouvertes.fr/hal-01635688
    • [29] Plankton networks driving carbon export in the oligotrophic ocean
      Lionel Guidi, Samuel Chaffron, Lucie Bittner, Damien Eveillard, Abdelhalim Larhlimi, Simon Roux, Youssef Darzi, Stéphane Audic, L. Berline, Jennifer R. Brum, Luis Pedro Coelho, Julio Cesar Ignacio Espinoza, Shruti Malviya, Shinichi Sunagawa, Céline Dimier, Stefanie Kandels-Lewis, Marc Picheral, Julie Poulain, Sarah Searson, Lars Stemmann, Fabrice Not, Pascal Hingamp, Sabrina Speich, Mick Follows, Lee Karp-Boss, Emmanuel Boss, Hiroyuki Ogata, Stephane Pesant, Jean Weissenbach, Patrick Wincker, Silvia G. Acinas, Peer Bork, Daniele Iudicone, Matthew B. Sullivan, Jeroen Raes, Eric Karsenti, Chris Bowler, Gabriel Gorsky.
      https://hal.sorbonne-universite.fr/hal-01275276
    • [30] Deciphering transcriptional regulations coordinating the response to environmental changes
      Vicente Acuña, Andrés Aravena, Carito Guziolowski, Damien Eveillard, Anne Siegel, Alejandro Maass.
      https://hal.archives-ouvertes.fr/hal-01260866
    • [31] Putative bacterial interactions from metagenomic knowledge with an integrative systems ecology approach
      Philippe Bordron, Mauricio Latorre, Maria-Paz Cortés, Mauricio Gonzales, Sven Thiele, Anne Siegel, Alejandro Maass, Damien Eveillard.
      https://hal.inria.fr/hal-01246173

      2015

    • [32] Combinatorial optimization methods to complete and analyse a metabolic network
      Julie Laniau, Anne Siegel, Damien Eveillard.
      https://hal.inria.fr/hal-01244179
    • [34] Using hybrid automata modelling to study phenotypic plasticity and allocation strategies in the plant mycorrhizal mutualism
      Shahrad Jamshidi, Jocelyn E. Behm, Damien Eveillard, E. Toby Kiers, Philippe Vandenkoornhuyse.
      https://hal.archives-ouvertes.fr/hal-01157450
    • [36] Predictive ecology in a changing world
      Nicolas Mouquet, Yvan Lagadeuc, Vincent Devictor, Luc Doyen, Anne Duputié, Damien Eveillard, Denis Faure, Eric Garnier, Olivier Gimenez, Philippe Huneman, Franck Jabot, Philippe Jarne, Dominique Joly, Romain Julliard, Sonia Kéfi, Gael Kergoat, Sandra Lavorel, Line Le Gall, Laurence Meslin, Serge Morand, Xavier Morin, Hélène Morlon, Gilles Pinay, Roger Pradel, F. M. Schurr, Wilfried Thuiller, Michel Loreau.
      https://hal.archives-ouvertes.fr/hal-01180277
    • [37] Revealing and analyzing networks of marine microbial ecosystems
      Damien Eveillard, Lionel Guidi, Lucie Bittner, Samuel Chaffron, Jeroen Raes, Eric Karsenti, Chris Bowler, Gaby Gorsky.
      https://hal.archives-ouvertes.fr/hal-01176727
    • [39] The genome-scale metabolic network of Ectocarpus siliculosus (EctoGEM): a resource to study brown algal physiology and beyond
      Sylvain Prigent, Guillaume Collet, Simon Dittami, Ludovic Delage, Floriane Ethis de Corny, Olivier Dameron, Damien Eveillard, Sven Thiele, Jeanne Cambefort, Catherine Boyen, Anne Siegel, Thierry Tonon.
      https://hal.inrae.fr/hal-02937717
    • [40] The genome-scale metabolic network of Ectocarpus siliculosus (EctoGEM): a resource to study brown algal physiology and beyond.
      Sylvain Prigent, Guillaume Collet, Simon M Dittami, Ludovic Delage, Floriane Ethis de Corny, Olivier Dameron, Damien Eveillard, Sven Thiele, Jeanne Cambefort, Catherine Boyen, Anne Siegel, Thierry Tonon.
      https://hal.archives-ouvertes.fr/hal-01057153
    • [42] A shift in the archaeal nitrifier community in response to natural and anthropogenic disturbances in the northern Gulf of Mexico
      Silvia E. Newell, Damien Eveillard, Mark J. Mccarthy, Wayne S. Gardner, Zhanfei Liu, Bess B. Ward.
      https://hal.archives-ouvertes.fr/hal-00951509

      2013

    • [43] An ASP application in integrative biology: identification of functional gene units
      Philippe Bordron, Damien Eveillard, Alejandro Maass, Anne Siegel, Sven Thiele.
      https://hal.inria.fr/hal-00853762
    • [44] Extending the Metabolic Network of Ectocarpus Siliculosus using Answer Set Programming
      Guillaume Collet, Damien Eveillard, Martin Gebser, Sylvain Prigent, Torsten Schaub, Anne Siegel, Sven Thiele.
      https://hal.inria.fr/hal-00853752
    • [46] Ecologie prédictive & changement planétaire
      Frédéric Austerlitz, Michael Blum, Sarah Calba, Jérôme Chave, Marc Choisy, Audrey Coreau, Vincent Devictor, Luc Doyen, Stéphane Dray, Anne Duputié, Damien Eveillard, Denis Faure, Charly Favier, Oscar Gaggiotti, Nicolas Galtier, Eric Garnier, Olivier Gimenez, Helene Guis, Vincent Herbreteau, Philippe Huneman, Franck Jabot, Philippe Jarne, Dominique Joly, Romain Julliard, Sonia Kéfi, Gael Kergoat, Gerard Lacroix, Yvan Lagadeuc, Sandra Lavorel, Jean-François Le Gaillard, Line Le Gall, Michel Loreau, Virginie Maris, Serge Morand, Xavier Morin, Hélène Morlon, Nicolas Mouquet, Gilles Pinay, Julien Pottier, Roger Pradel, Ophélie Ronce, Frank Schurr, Pascal Simonet, Céline Teplitsky, Wilfried Thuiller, Anne-Lise Tran, Samuel Venner.
      https://hal.archives-ouvertes.fr/hal-01911607
    • [47] Antagonistic interactions between heterotrophic bacteria as a potential regulator of community structure of hypersaline microbial mats.
      Richard A Long, Damien Eveillard, Shelli L M Franco, Eric Reeves, James L Pinckney.
      https://hal.archives-ouvertes.fr/hal-00752749
    • [48] Extending the Metabolic Network of Ectocarpus Siliculosus Using Answer Set Programming
      Guillaume Collet, Damien Eveillard, Martin Gebser, Sylvain Prigent, Torsten Schaub, Anne Siegel, Sven Thiele.
      https://hal.inrae.fr/hal-02745669

      2012

    • [50] Systems biology approaches at cellular level in the model organism Ectocarpus siliculosus to better understand brown algal physiology
      Thierry Tonon, Patricia Bonin, Sylvain Prigent, Z. Shao, Agnès Groisillier, Sylvie Rousvoal, Sophie Goulitquer, Jérémie Bourdon, Damien Eveillard, Catherine Boyen, Anne Siegel.
      https://hal.inria.fr/hal-00760640
    • [51] Environmental factors determining ammonia-oxidizing organism distribution and diversity in marine environments.
      Nicholas J Bouskill, Damien Eveillard, Diana Chien, Amal Jayakumar, Bess B Ward.
      https://hal.archives-ouvertes.fr/hal-00661746

      2011

    • [52] Toward systems biology in brown algae to explore acclimation and adaptation to the shore environment.
      Thierry Tonon, Damien Eveillard, Sylvain Prigent, Jérémie Bourdon, Philippe Potin, Catherine Boyen, Anne Siegel.
      https://hal.archives-ouvertes.fr/hal-00661751
    • [53] Toward Systems Biology in Brown Algae to Explore Acclimation and Adaptation to the Shore Environment
      Thierry Tonon, Damien Eveillard, Sylvain Prigent, Jérémie Bourdon, Philippe Potin, Catherine Boyen, Anne Siegel.
      https://hal.inrae.fr/hal-02937721
    • [55] Using logic programming for modeling the one-carbon metabolism network to study the impact of folate deficiency on methylation processes.
      Etienne Z Gnimpieba, Damien Eveillard, Jean-Louis Guéant, Abalo Chango.
      https://hal.archives-ouvertes.fr/hal-00626712
    • [56] Seasonal and annual reoccurrence in betaproteobacterial ammonia-oxidizing bacterial population structure.
      Nicholas J Bouskill, Damien Eveillard, Gregory O'Mullan, George A Jackson, Bess B Ward.
      https://hal.archives-ouvertes.fr/hal-00626710

      2010

    • [60] Targeting human Rad51 by specific DNA aptamers induces inhibition of homologous recombination.
      Susan F Martinez, Axelle Renodon-Cornière, Julian Nomme, Damien Eveillard, Fabrice Fleury, Masayuki Takahashi, Pierre Weigel.
      https://hal.archives-ouvertes.fr/hal-00626711
    • [61] Including Ordinary Differential Equations Based Constraints in the Standard CP Framework
      Alexandre Goldsztejn, Olivier Mullier, Damien Eveillard, Hiroshi Hosobe.
      http://hal.univ-nantes.fr/hal-00520054

      2009

    • [63] Temporal constraints of a gene regulatory network: Refining a qualitative simulation.
      Jamil Ahmad, Jérémie Bourdon, Damien Eveillard, Jonathan Fromentin, Olivier Roux, Christine Sinoquet.
      https://hal.archives-ouvertes.fr/hal-00415921
    • [64] Temporal constraints of a gene regulatory network: refining a qualitative simulation
      Jamil Ahmad, Jérémie Bourdon, Damien Eveillard, Jonathan Fromentin, Olivier Roux, Christine Sinoquet.
      https://hal.archives-ouvertes.fr/hal-00423353
    • [66] Time course gene expression in the one-carbon metabolism network using HepG2 cell line grown in folate-deficient medium.
      Abalo Chango, Afif Abdel Nour, Souad Bousserouel, Damien Eveillard, Pauline M Anton, Jean-Louis Guéant.
      https://hal.archives-ouvertes.fr/hal-00415914
    • [69] Qualitative modelling and analysis of gene regulatory networks: application to the adaptation of Escherichia coli bacterium to carbon availability
      Jamil Ahmad, Jérémie Bourdon, Damien Eveillard, Jonathan Fromentin, Olivier Roux, Christine Sinoquet.
      https://hal.archives-ouvertes.fr/hal-00359530
    • [73] Ammonia-oxidizing bacterial community composition in estuarine and oceanic environments assessed using a functional gene microarray
      Bess B. Ward, Damien Eveillard, Julie D. Kirshtein, Joshua D. Nelson, Mary A. Voytek, George A. Jackson.
      https://hal.archives-ouvertes.fr/hal-00346599

      2004

    • [75] KOALAB: A new method for regulatory motif search. Illustration on alternative splicing regulation in HIV-1
      Damien Eveillard, Abdelhalim Larhlimi, Delphine Ropers, Stéphanie Billaut, Sandrine Peyrefitte.
      https://hal.inria.fr/inria-00000915
    • [77] Building and analysing an integrative model of HIV-1 RNA alternative splicing
      Alexander Bockmayr, Arnaud Courtois, Damien Eveillard, Myriam Vezain.
      https://hal.inria.fr/inria-00000917
    • [78] A multi-scale constraint programming model of alternative splicing regulation
      Damien Eveillard, Delphine Ropers, Hidde de Jong, Christiane Branlant, Alexander Bockmayr.
      https://hal.inria.fr/inria-00000916

      2003

    • [79] Hybrid concurrent constraint programming: A well-suited formalism for modelling alternative splicing regulation (Abstract)
      Damien Eveillard, Arnaud Courtois, Alexander Bockmayr.
      https://hal.inria.fr/inria-00099705
    • [80] Multiscale modeling of alternative splicing regulation
      Damien Eveillard, Delphine Ropers, Hidde de Jong, Christiane Branlant, Alexander Bockmayr.
      https://hal.inria.fr/inria-00099792
    • [81] A Multi-Site Constraint Programming Model of Alternative Splicing Regulation
      Damien Eveillard, Delphine Ropers, Hidde de Jong, Christiane Branlant, Alexander Bockmayr.
      https://hal.inria.fr/inria-00071756
    • [83] Modeling the effects of SR proteins on alternative splicing
      Damien Eveillard, Delphine Ropers, Hidde de Jong, Christiane Branlant, Alexander Bockmayr.
      https://hal.inria.fr/inria-00101060
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Groupement de Recherche en Intégration de données Omics à Très grande Echelle